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Installation Log on Ubuntu 14.04 LTS on vSphere 5.5


My log to build a Ubuntu server to fit my software stack usage, R & Ruby.

Install SSH

Upgrade Ubuntu and enable SSH server
sudo apt-get update
sudo apt-get upgrade
sudo apt-get install open-vm-tools
sudo apt-get install openssh-server

Install JDK

sudo add-apt-repository ppa:webupd8team/java
sudo apt-get update && sudo apt-get install oracle-java7-installer

Install rvm

sudo su - # switch to root if not yet
apt-get install curl
curl -L | bash -s master # install rvm
sudo su -
rvm requirements # to install all depends

Install Ruby

rvm install ruby-2.2.3
gem source --remove
gem source --add
gem update --system
apt-get install libgmp3-dev
echo "gem: --no-document" >> /etc/gemrc
gem update
gem install bundler

Install Oracle Client

apt-get install unrar
apt-get install libaio-dev # must need if you want to use sqlplus
mkdir -p /opt/oracle && cd /opt/oracle
unrar x /home/eric/instantclient-all-linux.x64- .
chmod +x instantclient_11_2/sqlplus
ln -s /opt/oracle/instantclient_11_2/ /opt/oracle/instantclient_11_2/
ln -s /opt/oracle/instantclient_11_2/sqlplus /usr/local/bin/sqlplus
echo "/opt/oracle/instantclient_11_2" >> /etc/
# append below line to /etc/enviroment file

Install Oracle gems ruby-oci8

update the library and install ruby-oci8
sudo su -
mkdir -p network/admin
mv /home/eric/tnsnames.ora .
gem install ruby-oci8 # should be no any error here :-)

Install R

add R source
sudo vi /etc/apt/sources.list
# append below line to end of sources.list
# you can view mirror at
deb trusty/
prepare to install R
apt-get update
sudo apt-key adv --keyserver --recv-keys 51716619E084DAB9
# replace your NO_PUBKEY error above, if pause/block port, using 80 as below line
gpg --keyserver hkp:// --recv-keys E084DAB9
gpg -a --export E084DAB9 | sudo apt-key add -
apt-get update # make sure no error here
install R
apt-get install r-base

Install ROracle

manual install the ROracle
R CMD INSTALL DBI_0.3.1.tar.gz
R CMD INSTALL --configure-args='--with-oci-inc=/opt/oracle/instantclient_11_2/sdk/include --with-oci-lib=/opt/oracle/instantclient_11_2' ROracle_1.2-1.tar.gz

Install Passenger

Just following Passenger documentation

install phusionpassenger
sudo apt-key adv --keyserver hkp:// --recv-keys 561F9B9CAC40B2F7
sudo apt-get install -y apt-transport-https ca-certificates
sudo sh -c 'echo deb trusty main > /etc/apt/sources.list.d/passenger.list'
sudo apt-get update
sudo apt-get install -y nginx-extras passenger
passenger_root /usr/lib/ruby/vendor_ruby/phusion_passenger/locations.ini;
passenger_ruby /usr/local/rvm/gems/ruby-2.2.3/wrappers/ruby;
passenger_max_pool_size 30;

Install R studio server

Install R studio server

sudo apt-get install gdebi-core
sudo gdebi rstudio-server-0.99.473-amd64.deb
# Server Configuration File
server {
listen 80;
server_name cvprstudio;
client_max_body_size 10m;
location / {
proxy_redirect $scheme://$host/;
cd /etc/nginx/sites-enabled/
ln -s /etc/nginx/sites-available/cvprstudio cvprstudio
service nginx restart

Install RStudio Shiny Server

Install RStudio Shiny Server

run as root
R -e "install.packages('shiny', repos='')"
gdebi shiny-server-
server {
listen 80;
server_name shinyapp;
location / {
proxy_redirect $scheme://$host/;
cd /etc/nginx/sites-enabled/
ln -s /etc/nginx/sites-available/shinyapp shinyapp
service nginx restart

Following patch process in previous blog to re-install the shiny

R CMD INSTALL shiny_0.12.2-server.tar.gz

Notes to Convert Galaxy Note 2 N7100 to Note 4 by Just Refresh ROM


I’m stucked quite a while when refresh a Galaxy Note II for friends, so I decide write something down:

  1. Wait some time after USB drive installed N7100 driver, something due to china poor network and gfw, the driver install from internet may failed.
  2. Root before install any 3rd party recovery, it’s hardest part of change, I reference this for the Europe model, but you may need to found another way. This is must need before refresh any 3rd party recovery, because seems if not rooted, Knox will stop you do any further action.
  3. Install a 3rd recovery image, for example N7100 CWM Recovery v6.0.5.1
  4. Install customed notes 4 ROM for note 2, you can using this or mirror link

Resolve New RVM 1.26 GPG Key Import Failure Problem


When the hkp port blocked, so rvm suggested gpg --keyserver hkp:// --recv-keys D39DC0E3 always failed to running, here is how to resolve such problem.

  1. Find a hkp port not block server, run export after import the key:

    gpg --keyserver hkp:// --recv-keys D39DC0E3 gpg --export --armor D39DC0E3

  2. Go to hkp port blocked server, run:

    gpg --import -

and copy and paste the step 1 server public key content and press Ctrl+D

Another option you can try is using port 80, but it’s can not always work.

apt-key adv --keyserver hkp:// --recv 561F9B9CAC40B2F7

Compile Eventmachine 1.0.3 in Ruby 2.1.3 on Windows


eventmachine didn’t release a new gems for a long time, so we have to manually compile if you decide using Ruby 2.1.3, it’s probably the most complex gems which can still successfully install on windows as far as I known, here is the steps for your interesting:

git clone
cd eventmachine && bundle install

Now you will meet the bluecloth can not install problem first, which you can following stackoverflow steps including patch ext/bluecloth.h and 6 steps.

Now you need using updated version of rake-compiler (v0.9.3) to continue, so change eventmachine.gemspec to that version and do the bundle install again.

Now we can running rake package and it should generate the updated 1.0.3 gem file you need, but before that you need another depend lzma package mentioned in Ruby Installer Google Group, I only tested x86 but the x64 should be same.

  1. Put the download openssl-1.0.0m-x86-windows.tar.lzma to c:\temp
  2. run C:\DevKit\devkitvars.bat
  3. c:\Temp> bsdtar --lzma -xf openssl-1.0.0m-x86-windows.tar.lzma
  4. c:\git\eventmachine\pkg> gem install ./eventmachine-1.0.3.gem --platform=ruby -- --with-opt-dir=C:/Temp

Now enjoy eventmachine on ruby 2.1.3 windows!

Checking Gem Reverse Dependencies


gem dependency parser --reverse-dependencies or -R in short only works in local, so if you want to get all gems from rubygems, can using:

ruby -ropen-uri -rpp -ryaml -e 'pp YAML.load(open(""))'

The tip is coming from Faria DevTips.

Installation Ruby 2.1.3 on Windows Log


Except simply install the ruby 2.1.3 from rubyinstaller and it’s DevKit, here is my log when I meet the problem during ruby 2.1.3 on a Windows 7 32bits machine.

  1. Comments out the warn “DL is deprecated, please use Fiddle” at C:\Ruby21\lib\ruby\2.1.0\dl.rb
  2. Install yajl-ruby via gem install yajl-ruby -v 1.1.0 --platform ruby
  3. Install RedCloth via gem install RedCloth --platform ruby and move the file C:\Ruby21\lib\ruby\gems\2.1.0\gems\RedCloth-4.2.9\lib\ to new created folder C:\Ruby21\lib\ruby\gems\2.1.0\gems\RedCloth-4.2.9\lib\2.1.
  4. Install sqlite3 via:

    1. run C:\DevKit\devkitvars.bat
    2. mkdir c:\temp
    3. download to c:\temp
    4. c:\Temp>bsdtar --lzma -xf sqlite-
    5. c:\Temp>gem install sqlite3 --platform=ruby -- --with-opt-dir=C:/Temp
  5. Install bcrypt via gem install bcrypt --platform ruby

  6. Install win32console via gem install win32console --platform ruby

  7. Install ffi via gem install ffi --platform ruby

  8. Install pg via gem install pg --platform ruby

  9. Install mysql following stackoverflow via gem install mysql2 --platform=ruby -- '--with-mysql-dir="C:\mysql-connector"'

  10. Install puma via gem install puma -- --with-opt-dir=c:\temp

Setting global environment setting:


Also do not using ansicon in ruby 2.1.3 any more, seems not compatible.

How to Install Gem Curb in Windows


After read the post in Ruby-China say how to use mechanize and curl to login Ruby-China, I decide to install curb, seems still a little tricky.

First download last available libcurl in windows, which currently is 7.34.0.

Extract to C:\ and install the curb via below command.

gem install curb --platform=ruby -- --with-curl-lib=C:/curl-7.34.0-devel-mingw32/bin --with-curl-include=C:/curl-7.34.0-devel-mingw32/include

Some relative issues in github about curb, #37, #183

To make SSL certification work, you need to set your windows environment variable, the file can be download here


Finally, need copy all DLL and EXE file in C:\curl-7.34.0-devel-mingw32\bin to C:\Ruby200\bin.